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JYU Condensed Matter Theory
usadelndsoc
Commits
4e1d03bf
Commit
4e1d03bf
authored
2 years ago
by
patavirt
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solver: tweak
parent
b2f33784
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usadelndsoc/solver.py
+48
-8
48 additions, 8 deletions
usadelndsoc/solver.py
with
48 additions
and
8 deletions
usadelndsoc/solver.py
+
48
−
8
View file @
4e1d03bf
...
...
@@ -10,7 +10,16 @@ import hashlib
import
tempfile
import
pickle
from
scipy.sparse
import
coo_matrix
from
scipy.sparse.linalg
import
splu
,
spilu
,
gcrotmk
,
LinearOperator
,
lgmres
,
gmres
,
cg
from
scipy.sparse.linalg
import
(
splu
,
spilu
,
gcrotmk
,
LinearOperator
,
lgmres
,
gmres
,
cg
,
tfqmr
,
)
from
scipy.special
import
zeta
from
scipy.linalg
import
blas
...
...
@@ -85,15 +94,16 @@ class Core:
self
.
_U
[:,
1
:,
3
,
:,
:]
=
np
.
linalg
.
inv
(
self
.
_U
[:,
:
-
1
,
1
,
:,
:])
def
new_action
(
self
):
self
.
init_U
()
return
Action
(
self
.
Lx
,
self
.
Ly
,
self
.
alpha
,
self
.
_mask
,
self
.
_U
,
self
.
_Omega
)
@property
def
x
(
self
):
return
np
.
linspace
(
-
self
.
Lx
/
2
,
self
.
Lx
/
2
,
self
.
_
nx
)
return
np
.
linspace
(
-
self
.
Lx
/
2
,
self
.
Lx
/
2
,
self
.
_
shape
[
0
]
)
@property
def
y
(
self
):
return
np
.
linspace
(
-
self
.
Ly
/
2
,
self
.
Ly
/
2
,
self
.
_
ny
)
return
np
.
linspace
(
-
self
.
Ly
/
2
,
self
.
Ly
/
2
,
self
.
_
shape
[
1
]
)
U
=
_array_property
(
"
_U
"
)
Omega
=
_array_property
(
"
_Omega
"
)
...
...
@@ -135,6 +145,7 @@ class Solver:
def
_solve
(
self
,
eval_rhs
,
eval_jac_mul
,
eval_jac
,
check_step
,
check_final
,
...
...
@@ -145,6 +156,7 @@ class Solver:
preconditioner
=
None
,
solver
=
None
,
restart
=
0
,
finite_difference
=
True
,
):
A_size
=
2
*
Phi0
.
size
A_shape
=
(
A_size
,
A_size
)
...
...
@@ -171,7 +183,13 @@ class Solver:
skip_precond
=
0
if
solver
is
None
:
solver
=
"
gcrotmk
"
solver
=
"
lgmres
"
if
A_size
>
20000
:
_log_solve
.
debug
(
f
"
Problem too large (
{
A_size
}
): cannot compute hessian
"
)
preconditioner
=
"
none
"
if
not
np
.
isfinite
(
Phi
).
all
():
Phi
=
np
.
zeros_like
(
Phi
)
...
...
@@ -219,13 +237,17 @@ class Solver:
nonlocal
count
count
+=
1
v
=
v
.
view
(
np
.
complex128
).
reshape
(
Phi
.
shape
)
scale
=
rdiff
*
max
(
1
,
Phi_norm
)
/
max
(
1
,
_norm
(
v
))
return
(
eval_rhs
(
Phi
+
scale
*
v
)
-
F
)
/
scale
if
finite_difference
:
scale
=
rdiff
*
max
(
1
,
Phi_norm
)
/
max
(
1
,
_norm
(
v
))
return
(
eval_rhs
(
Phi
+
scale
*
v
)
-
F
)
/
scale
else
:
return
eval_jac_mul
(
Phi
,
v
)
A
=
LinearOperator
(
matvec
=
op
,
shape
=
A_shape
,
dtype
=
A_dtype
)
l_maxiter
=
2
l_inner_m
=
15
l_outer_k
=
5
if
solver
==
"
cg
"
:
dx
,
info
=
cg
(
...
...
@@ -236,6 +258,15 @@ class Solver:
atol
=
0
,
maxiter
=
l_maxiter
,
)
elif
solver
==
"
tfqmr
"
:
dx
,
info
=
tfqmr
(
A
,
-
F
,
M
=
M
,
tol
=
1e-3
,
atol
=
0
,
maxiter
=
l_maxiter
,
)
elif
solver
==
"
lgmres
"
:
dx
,
info
=
lgmres
(
A
,
...
...
@@ -246,8 +277,9 @@ class Solver:
maxiter
=
l_maxiter
,
inner_m
=
l_inner_m
,
outer_v
=
outer_v
,
outer_k
=
l_outer_k
,
store_outer_Av
=
False
,
prepend_outer_v
=
Fals
e
,
prepend_outer_v
=
Tru
e
,
)
elif
solver
==
"
gcrotmk
"
:
dx
,
info
=
gcrotmk
(
...
...
@@ -315,6 +347,7 @@ class Solver:
Phi
[...]
=
0
return
self
.
_solve
(
eval_rhs
,
eval_jac_mul
,
eval_jac
,
check_step
,
check_final
,
...
...
@@ -341,7 +374,6 @@ class Solver:
return
Phi
def
_check_step
(
self
,
Phi
,
dx
):
return
True
return
(
abs
(
Phi
+
dx
)
<
1.0
).
all
()
def
_check_final
(
self
,
Phi
):
...
...
@@ -351,6 +383,9 @@ class Solver:
def
_eval_rhs
(
self
,
Phi
):
return
self
.
_action
.
grad
(
Phi
).
ravel
().
view
(
np
.
float_
)
def
_eval_jac_mul
(
self
,
Phi
,
dPhi
):
return
self
.
_action
.
hess_mul
(
Phi
,
dPhi
).
ravel
().
view
(
np
.
float_
)
def
_eval_jac
(
self
,
Phi
):
# complex jacobian of S
H
=
self
.
_action
.
hess
(
Phi
)
...
...
@@ -372,10 +407,13 @@ class Solver:
Phi00
=
np
.
zeros_like
(
self
.
_Phi
)
self
.
_action
=
kw
.
pop
(
"
action
"
,
None
)
if
self
.
_action
is
None
:
_log_solve
.
debug
(
"
Initialize action
"
)
self
.
_action
=
self
.
_core
.
new_action
()
self
.
_action
.
compute
(
Phi00
)
self
.
_action
.
omega
=
omega
self
.
_Phi
=
self
.
_solve
(
self
.
_eval_rhs
,
self
.
_eval_jac_mul
,
self
.
_eval_jac
,
self
.
_check_step
,
self
.
_check_final
,
...
...
@@ -428,7 +466,9 @@ class Solver:
self
.
_M
=
None
self
.
_Phi
[...]
=
0
_log_solve
.
debug
(
"
Initialize action
"
)
action
=
self
.
_core
.
new_action
()
action
.
compute
(
self
.
_Phi
)
with
np
.
nditer
(
omega
,
[
"
multi_index
"
])
as
it
:
for
v
in
it
:
...
...
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